BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015G04SP1|AL426899
(776 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1338 1515 0.0
>3x_Contig1338
Length = 8134
Score = 1515 bits (761), Expect = 0.0
Identities = 770/776 (99%)
Strand = Plus / Minus
Query: 1 cgtacttcataggatcatttctataggaatcgtcactctttgactcttcaaaagagccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3311 cgtacttcataggatcatttctataggaatcgtcactctttgactcttcaaaagagccac 3252
Query: 61 tgaatccaacttggttgatgagccgaagaacctttgtacccaagagtgaganaaaagaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 3251 tgaatccaacttggttgatgagccgaagaacctttgtacccaagagtgagaaaaaagaat 3192
Query: 121 gtattattagcttggtccacaacccttagcggtttggccatctactcccacatttttgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3191 gtattattagcttggtccacaacccttagcggtttggccatctactcccacatttttgct 3132
Query: 181 ttgccttttgcatatggtttgtgtatggatagagaacttagcttggtggtttagaagtag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3131 ttgccttttgcatatggtttgtgtatggatagagaacttagcttggtggtttagaagtag 3072
Query: 241 gaatttcgattctatgctttttgaacttaccggcttttttcttgttttaactcctgcatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3071 gaatttcgattctatgctttttgaacttaccggcttttttcttgttttaactcctgcatg 3012
Query: 301 amccgccttttaattggcgcgatgatctttgcccagtttgtggacttcttcgtgagggga 360
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3011 aaccgccttttaattggcgcgatgatctttgcccagtttgtggacttcttcgtgagggga 2952
Query: 361 caaacgtattgggtgggtacaaatggcagtctgacaagttttcatttatatwtttcctaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 2951 caaacgtattgggtgggtacaaatggcagtctgacaagttttcatttatatatttcctaa 2892
Query: 421 gttgtttccttttgtcaatagatgcatcttgcatgcattctatgacactccatcaaaggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2891 gttgtttccttttgtcaatagatgcatcttgcatgcattctatgacactccatcaaaggt 2832
Query: 481 ttgatggacaatttagaaaatatatgatactattaccgatttttagggattagactaact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2831 ttgatggacaatttagaaaatatatgatactattaccgatttttagggattagactaact 2772
Query: 541 ctccatttgaatgttaagtggaagaagtaagtsttctcataaaatcgaccattatgttcg 600
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 2771 ctccatttgaatgttaagtggaagaagtaagtattctcataaaatcgaccattatgttcg 2712
Query: 601 aaaagtgttaatagtaaatatagagcaataataataataggtcgtaaatmatagtaaaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 2711 aaaagtgttaatagtaaatatagagcaataataataataggtcgtaaataatagtaaaaa 2652
Query: 661 caatgatcataaaagtatatacctgtcatgaggacaacaataagtttgttactttcttca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2651 caatgatcataaaagtatatacctgtcatgaggacaacaataagtttgttactttcttca 2592
Query: 721 tcagtttgattttttttttggcagatgtgaattcaatatttgamgccacagagtgt 776
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2591 tcagtttgattttttttttggcagatgtgaattcaatatttgacgccacagagtgt 2536
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7346
Number of Sequences: 1807
Number of extensions: 7346
Number of successful extensions: 54
Number of sequences better than 1.0e-20: 1
length of query: 776
length of database: 10,358,551
effective HSP length: 16
effective length of query: 760
effective length of database: 10,329,639
effective search space: 7850525640
effective search space used: 7850525640
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)